Rhizobium leguminosarum strain Vaf12

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum strain Vaf12 is a Gram-negative, mesophilic bacterium primarily residing in soil environments. It exhibits a rod shape and is classified as a chemoheterotroph, utilizing organic compounds as its energy source. This strain is aerobic, requiring oxygen for growth, and displays mobility due to the presence of flagella, allowing it to navigate its soil habitat effectively. Notably, R. leguminosarum strain Vaf12 forms symbiotic relationships with various leguminous plants, including Lens culinaris (lentils), Trifolium species (such as clover), Vavilovia formosa, Medicago sativa (alfalfa), and Lathyrus oleraceus. This symbiosis is crucial for nitrogen fixation, contributing to soil fertility and enhancing plant growth by providing essential nutrients. The strain features a unique genetic structure, with four replicons and a double membrane organization, which is characteristic of its bacterial classification. It is important to note that R. leguminosarum strain Vaf12 does not form spores, which may influence its ecological strategies and interactions within its environment. In summary, the ecological role of Rhizobium leguminosarum strain Vaf12 extends beyond its individual characteristics, as it actively participates in nitrogen-fixing symbioses that benefit host plants and contribute to soil health. This relationship underscores the significance of such bacteria in agricultural systems, promoting sustainable practices and enhancing crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
Strainstrain Vaf12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum strain Vaf12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipSymbiotic
Host(s)Phaseolus vulgaris, Vicia, Lathyrus
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium leguminosarum strain Vaf12 plasmid unnamed1.

Gene Summary

Adenine Count

221669 bp

Thymine Count

221061 bp

Guanine Count

337156 bp

Cytosine Count

333180 bp

Genome Length

1113066 bp

Protein-coding Genes

1075 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dimethylsulfonioproprionate lyase family proteinA4A59_RS29355Not AvailablePositive848677 - 84937225169.3
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseA4A59_RS29360Not AvailablePositive849524 - 85065140042.5
s-formylglutathione hydrolaseA4A59_RS29365Not AvailablePositive850655 - 85149130840.4
s-(hydroxymethyl)glutathione synthaseA4A59_RS29370Not AvailablePositive851546 - 85211820374.4
glxa family transcriptional regulatorA4A59_RS29375Not AvailablePositive852441 - 85345137313.8
is110 family transposaseA4A59_RS29380Not AvailablePositive853657 - 85468837777.9
xaa-pro peptidase family proteinA4A59_RS29385Not AvailableNegative855048 - 85632848551.5
hybrid-cluster nad(p)-dependent oxidoreductaseA4A59_RS29390Not AvailableNegative856375 - 85744538495.0
srpbcc family proteinA4A59_RS29395Not AvailableNegative857456 - 85870946763.8
lysr substrate-binding domain-containing proteinA4A59_RS29400Not AvailablePositive858821 - 85970832086.3

Displaying genes 841 – 850 of 2070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.