Rhizobium leguminosarum strain Vaf12

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum strain Vaf12 is a Gram-negative, mesophilic bacterium primarily residing in soil environments. It exhibits a rod shape and is classified as a chemoheterotroph, utilizing organic compounds as its energy source. This strain is aerobic, requiring oxygen for growth, and displays mobility due to the presence of flagella, allowing it to navigate its soil habitat effectively. Notably, R. leguminosarum strain Vaf12 forms symbiotic relationships with various leguminous plants, including Lens culinaris (lentils), Trifolium species (such as clover), Vavilovia formosa, Medicago sativa (alfalfa), and Lathyrus oleraceus. This symbiosis is crucial for nitrogen fixation, contributing to soil fertility and enhancing plant growth by providing essential nutrients. The strain features a unique genetic structure, with four replicons and a double membrane organization, which is characteristic of its bacterial classification. It is important to note that R. leguminosarum strain Vaf12 does not form spores, which may influence its ecological strategies and interactions within its environment. In summary, the ecological role of Rhizobium leguminosarum strain Vaf12 extends beyond its individual characteristics, as it actively participates in nitrogen-fixing symbioses that benefit host plants and contribute to soil health. This relationship underscores the significance of such bacteria in agricultural systems, promoting sustainable practices and enhancing crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
Strainstrain Vaf12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum strain Vaf12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipSymbiotic
Host(s)Phaseolus vulgaris, Vicia, Lathyrus
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium leguminosarum strain Vaf12 plasmid unnamed1.

Gene Summary

Adenine Count

221669 bp

Thymine Count

221061 bp

Guanine Count

337156 bp

Cytosine Count

333180 bp

Genome Length

1113066 bp

Protein-coding Genes

1075 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypc/hybg/hupf family hydrogenase formation chaperoneA4A59_RS34930Not AvailableNegative413382 - 41367810463.8
ardc family proteinA4A59_RS34935Not AvailableNegative413775 - 41434920942.9
hyad/hybd family hydrogenase maturation endopeptidaseA4A59_RS34940Not AvailableNegative414361 - 41496922104.5
ni/fe-hydrogenase, b-type cytochrome subunitA4A59_RS34945Not AvailableNegative414970 - 41569227893.9
nickel-dependent hydrogenase large subunitA4A59_RS34950Not AvailableNegative415706 - 41749666125.7
hydrogenase small subunitA4A59_RS34955Not AvailableNegative417519 - 41860139137.0
ardc family proteinA4A59_RS34960Not AvailableNegative418756 - 42051263264.3
abc transporter atp-binding proteinA4A59_RS34965Not AvailableNegative420734 - 42190042379.4
gfo/idh/moca family proteinA4A59_RS34970Not AvailableNegative421980 - 42300536679.9
carbohydrate abc transporter permeaseA4A59_RS34975Not AvailableNegative423034 - 42386730576.4

Displaying genes 1751 – 1760 of 2070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.