Rhizobium leguminosarum strain Vaf12

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum strain Vaf12 is a Gram-negative, mesophilic bacterium primarily residing in soil environments. It exhibits a rod shape and is classified as a chemoheterotroph, utilizing organic compounds as its energy source. This strain is aerobic, requiring oxygen for growth, and displays mobility due to the presence of flagella, allowing it to navigate its soil habitat effectively. Notably, R. leguminosarum strain Vaf12 forms symbiotic relationships with various leguminous plants, including Lens culinaris (lentils), Trifolium species (such as clover), Vavilovia formosa, Medicago sativa (alfalfa), and Lathyrus oleraceus. This symbiosis is crucial for nitrogen fixation, contributing to soil fertility and enhancing plant growth by providing essential nutrients. The strain features a unique genetic structure, with four replicons and a double membrane organization, which is characteristic of its bacterial classification. It is important to note that R. leguminosarum strain Vaf12 does not form spores, which may influence its ecological strategies and interactions within its environment. In summary, the ecological role of Rhizobium leguminosarum strain Vaf12 extends beyond its individual characteristics, as it actively participates in nitrogen-fixing symbioses that benefit host plants and contribute to soil health. This relationship underscores the significance of such bacteria in agricultural systems, promoting sustainable practices and enhancing crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
Strainstrain Vaf12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum strain Vaf12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipSymbiotic
Host(s)Phaseolus vulgaris, Vicia, Lathyrus
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium leguminosarum strain Vaf12 plasmid unnamed1.

Gene Summary

Adenine Count

221669 bp

Thymine Count

221061 bp

Guanine Count

337156 bp

Cytosine Count

333180 bp

Genome Length

1113066 bp

Protein-coding Genes

1075 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorA4A59_RS30505Not AvailableNegative1104981 - 110535813396.1
response regulator transcription factorA4A59_RS30510Not AvailableNegative1105362 - 110600323594.3
pas domain-containing proteinA4A59_RS30515Not AvailableNegative1106000 - 1109635136596.0
sdr family oxidoreductaseA4A59_RS30520Not AvailablePositive1109987 - 111073926549.6
hypothetical proteinA4A59_RS30525Not AvailablePositive1111480 - 111279346287.5
plasmid partitioning protein repaA4A59_RS35265Not AvailablePositive1 - 121845163.0
plasmid partitioning protein repbA4A59_RS35270Not AvailablePositive1215 - 220436060.3
plasmid replication protein repcA4A59_RS35275Not AvailablePositive2404 - 369947269.1
type ii toxin-antitoxin system rele/pare family toxinA4A59_RS35280Not AvailableNegative3729 - 405512518.0
type ii toxin-antitoxin system phd/yefm family antitoxinA4A59_RS35285Not AvailableNegative4055 - 433610441.7

Displaying genes 1071 – 1080 of 2070 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.