Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit | CFBP5506_RS18260 | Not Available | Negative | 1123326 - 1125203 | 66003.9 |
| class i fructose-bisphosphate aldolase | CFBP5506_RS18265 | Not Available | Negative | 1125886 - 1126911 | 37442.8 |
| phosphoglycerate kinase | CFBP5506_RS18270 | Not Available | Negative | 1127103 - 1128305 | 41469.7 |
| potassium/proton antiporter | CFBP5506_RS18275 | Not Available | Negative | 1128373 - 1130238 | 66434.5 |
| hypothetical protein | CFBP5506_RS18280 | Not Available | Positive | 1130624 - 1130887 | 9717.67 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CFBP5506_RS18285 | Not Available | Negative | 1131086 - 1132096 | 35990.2 |
| transketolase | CFBP5506_RS18290 | Not Available | Negative | 1132159 - 1134141 | 71554.1 |
| duf4164 domain-containing protein | CFBP5506_RS18295 | Not Available | Positive | 1134466 - 1134738 | 10400.3 |
| cell division protein zapa | CFBP5506_RS18300 | Not Available | Positive | 1134749 - 1135126 | 13755.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1135206 - 1135364 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


