Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2312 domain-containing protein | CFBP5506_RS18110 | Not Available | Positive | 1097773 - 1098030 | 9708.63 |
| hypothetical protein | CFBP5506_RS18115 | Not Available | Negative | 1098099 - 1098719 | 22556.8 |
| type b 50s ribosomal protein l36 | CFBP5506_RS18120 | Not Available | Negative | 1098819 - 1098944 | 4960.26 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CFBP5506_RS18125 | Not Available | Negative | 1099091 - 1100167 | 38181.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CFBP5506_RS18130 | Not Available | Negative | 1100179 - 1100679 | 17260.6 |
| ydch family protein | CFBP5506_RS18135 | Not Available | Negative | 1100695 - 1100898 | 7753.44 |
| ydch family protein | CFBP5506_RS18140 | Not Available | Positive | 1101132 - 1101308 | 6635.98 |
| sulfite exporter taue/safe family protein | CFBP5506_RS18145 | Not Available | Negative | 1101410 - 1102174 | 27206.5 |
| thiamine phosphate synthase | CFBP5506_RS18150 | Not Available | Positive | 1102279 - 1102932 | 22818.2 |
| tetratricopeptide repeat protein | CFBP5506_RS18155 | Not Available | Positive | 1102941 - 1104041 | 40235.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


