Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homospermidine synthase | CFBP5506_RS18060 | Not Available | Negative | 1085336 - 1086781 | 53919.8 |
| sensor domain-containing diguanylate cyclase | CFBP5506_RS18065 | Not Available | Positive | 1087040 - 1087948 | 34525.4 |
| aminotransferase class iv family protein | CFBP5506_RS18070 | Not Available | Negative | 1087945 - 1088580 | 23730.5 |
| m3 family oligoendopeptidase | CFBP5506_RS18075 | Not Available | Negative | 1088679 - 1090529 | 68977.8 |
| sigma-54-dependent transcriptional regulator | CFBP5506_RS18080 | Not Available | Positive | 1090699 - 1092246 | 56143.5 |
| duf882 domain-containing protein | CFBP5506_RS18085 | Not Available | Positive | 1092423 - 1094312 | 66177.7 |
| pyruvate kinase | CFBP5506_RS18090 | Not Available | Negative | 1094399 - 1095838 | 51178.0 |
| duf1036 domain-containing protein | CFBP5506_RS18095 | Not Available | Negative | 1095838 - 1096320 | 17867.0 |
| n-formylglutamate amidohydrolase | CFBP5506_RS18100 | Not Available | Positive | 1096517 - 1097305 | 29412.1 |
| duf1244 domain-containing protein | CFBP5506_RS18105 | Not Available | Positive | 1097321 - 1097626 | 11829.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


