Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase | CFBP5506_RS18010 | Not Available | Negative | 1073950 - 1075173 | 45220.2 |
| utp--glucose-1-phosphate uridylyltransferase galu | CFBP5506_RS18015 | Not Available | Positive | 1075369 - 1076256 | 32405.2 |
| polysaccharide biosynthesis protein uppp | CFBP5506_RS18020 | Not Available | Negative | 1076315 - 1077826 | 53511.1 |
| pas domain-containing protein | CFBP5506_RS18025 | Not Available | Positive | 1078245 - 1078610 | 14159.0 |
| kpsf/gutq family sugar-phosphate isomerase | CFBP5506_RS18030 | Not Available | Positive | 1078722 - 1079717 | 34759.2 |
| nfed family protein | CFBP5506_RS18035 | Not Available | Negative | 1079738 - 1080202 | 17181.0 |
| spfh domain-containing protein | CFBP5506_RS18040 | Not Available | Negative | 1080205 - 1081254 | 37559.2 |
| ferrochelatase | CFBP5506_RS18045 | Not Available | Negative | 1081312 - 1082346 | 39423.3 |
| 5'-nucleotidase c-terminal domain-containing protein | CFBP5506_RS18050 | Not Available | Negative | 1082697 - 1084595 | 66581.9 |
| outer membrane lipoprotein omp10 | CFBP5506_RS18055 | Not Available | Negative | 1084812 - 1085186 | 13070.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


