Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CFBP5506_RS17910 | Not Available | Positive | 1043652 - 1044728 | 38670.9 |
| efflux rnd transporter periplasmic adaptor subunit | CFBP5506_RS17915 | Not Available | Positive | 1044728 - 1045813 | 38208.5 |
| efflux rnd transporter permease subunit | CFBP5506_RS17920 | Not Available | Positive | 1045810 - 1048881 | 112185.0 |
| fadr/gntr family transcriptional regulator | CFBP5506_RS17925 | Not Available | Positive | 1049079 - 1049795 | 26079.2 |
| aspartate ammonia-lyase | CFBP5506_RS17930 | Not Available | Negative | 1049764 - 1051191 | 50530.7 |
| amino acid permease | CFBP5506_RS17935 | Not Available | Positive | 1051467 - 1052918 | 52158.8 |
| asparaginase | CFBP5506_RS17940 | Not Available | Positive | 1052915 - 1053868 | 32117.5 |
| k(+)-transporting atpase subunit f | CFBP5506_RS17945 | Not Available | Positive | 1054243 - 1054332 | 3343.12 |
| potassium-transporting atpase subunit kdpa | CFBP5506_RS17950 | Not Available | Positive | 1054365 - 1056068 | 59472.6 |
| hypothetical protein | CFBP5506_RS17955 | Not Available | Positive | 1056078 - 1056242 | 5484.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


