Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding glutamate synthase family protein | CFBP5506_RS17860 | Not Available | Positive | 1033368 - 1034696 | 47319.6 |
| type iii glutamate--ammonia ligase | CFBP5506_RS17865 | Not Available | Positive | 1034780 - 1036087 | 48346.4 |
| formyltetrahydrofolate deformylase | CFBP5506_RS17870 | Not Available | Positive | 1036176 - 1037060 | 32695.5 |
| hal/pal/tal family ammonia-lyase | CFBP5506_RS17875 | Not Available | Negative | 1037043 - 1038587 | 53567.3 |
| quaternary amine abc transporter atp-binding protein | CFBP5506_RS17880 | Not Available | Negative | 1038580 - 1039410 | 30304.9 |
| abc transporter permease | CFBP5506_RS17885 | Not Available | Negative | 1039403 - 1040260 | 30897.5 |
| abc transporter substrate-binding protein | CFBP5506_RS17890 | Not Available | Negative | 1040356 - 1041393 | 37032.9 |
| hypothetical protein | CFBP5506_RS17895 | Not Available | Negative | 1041495 - 1041980 | 17400.7 |
| histidine utilization repressor | CFBP5506_RS17900 | Not Available | Positive | 1041967 - 1042707 | 27469.0 |
| tetr/acrr family transcriptional regulator | CFBP5506_RS17905 | Not Available | Negative | 1042734 - 1043348 | 23528.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


