Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFBP5506_RS17810 | Not Available | Negative | 1023253 - 1023555 | 10711.0 |
| laci family dna-binding transcriptional regulator | CFBP5506_RS17815 | Not Available | Positive | 1023704 - 1024744 | 38124.8 |
| sarcosine oxidase subunit gamma family protein | CFBP5506_RS17820 | Not Available | Negative | 1024754 - 1025290 | 19220.4 |
| sarcosine oxidase subunit alpha | CFBP5506_RS17825 | Not Available | Negative | 1025283 - 1028246 | 105704.0 |
| sarcosine oxidase subunit delta | CFBP5506_RS17830 | Not Available | Negative | 1028243 - 1028518 | 10273.0 |
| sarcosine oxidase subunit beta family protein | CFBP5506_RS17835 | Not Available | Negative | 1028596 - 1029846 | 45159.9 |
| glxa family transcriptional regulator | CFBP5506_RS17840 | Not Available | Positive | 1029936 - 1030910 | 35300.4 |
| helix-turn-helix domain-containing protein | CFBP5506_RS17845 | Not Available | Positive | 1030945 - 1031625 | 24945.6 |
| class ii glutamine amidotransferase | CFBP5506_RS17850 | Not Available | Positive | 1031722 - 1032627 | 31902.0 |
| gxgxg domain-containing protein | CFBP5506_RS17855 | Not Available | Positive | 1032665 - 1033351 | 23697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


