Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFBP5506_RS13775 | Not Available | Positive | 94243 - 94563 | 12423.2 |
| laci family dna-binding transcriptional regulator | CFBP5506_RS13780 | Not Available | Positive | 94721 - 95743 | 36814.5 |
| trans-3-hydroxy-l-proline dehydratase | CFBP5506_RS13785 | Not Available | Negative | 95945 - 96973 | 36927.2 |
| aconitase x | CFBP5506_RS13790 | Not Available | Negative | 96984 - 98693 | 59666.6 |
| nad(p)/fad-dependent oxidoreductase | CFBP5506_RS13795 | Not Available | Negative | 98806 - 100047 | 44131.3 |
| amino acid abc transporter atp-binding protein | CFBP5506_RS13800 | Not Available | Negative | 100047 - 100769 | 26286.3 |
| amino acid abc transporter permease | CFBP5506_RS13805 | Not Available | Negative | 100762 - 101415 | 23856.8 |
| amino acid abc transporter permease | CFBP5506_RS13810 | Not Available | Negative | 101428 - 102093 | 24346.4 |
| transporter substrate-binding domain-containing protein | CFBP5506_RS13815 | Not Available | Negative | 102166 - 102972 | 28864.4 |
| ldh family oxidoreductase | CFBP5506_RS13820 | Not Available | Positive | 103360 - 104397 | 36000.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


