Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CFBP5506_RS17760 | Not Available | Positive | 1012336 - 1013097 | 26462.7 |
| abc transporter substrate-binding protein | CFBP5506_RS17765 | Not Available | Negative | 1013138 - 1014250 | 40914.8 |
| sensor histidine kinase | CFBP5506_RS17770 | Not Available | Negative | 1014247 - 1015638 | 51436.1 |
| response regulator transcription factor | CFBP5506_RS17775 | Not Available | Negative | 1015625 - 1016302 | 24935.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CFBP5506_RS17780 | Not Available | Positive | 1016555 - 1017529 | 34332.4 |
| tripartite tricarboxylate transporter tctb family protein | CFBP5506_RS17785 | Not Available | Positive | 1017693 - 1018166 | 16584.6 |
| tripartite tricarboxylate transporter permease | CFBP5506_RS17790 | Not Available | Positive | 1018197 - 1019708 | 51983.1 |
| sugar phosphate isomerase/epimerase family protein | CFBP5506_RS17795 | Not Available | Negative | 1019947 - 1020876 | 34363.7 |
| gfo/idh/moca family protein | CFBP5506_RS17800 | Not Available | Negative | 1020974 - 1022146 | 42876.1 |
| sugar phosphate isomerase/epimerase family protein | CFBP5506_RS17805 | Not Available | Negative | 1022226 - 1023128 | 34705.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


