Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl-type esterase/lipase family protein | CFBP5506_RS17710 | Not Available | Negative | 1001664 - 1002290 | 23469.0 |
| 2-dehydro-3-deoxygalactonokinase | CFBP5506_RS17715 | Not Available | Negative | 1002359 - 1003270 | 32042.1 |
| dihydrodipicolinate synthase family protein | CFBP5506_RS17720 | Not Available | Positive | 1003386 - 1004294 | 31533.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | CFBP5506_RS17725 | Not Available | Positive | 1004291 - 1005457 | 42524.0 |
| abc transporter substrate-binding protein | CFBP5506_RS17730 | Not Available | Positive | 1005482 - 1006753 | 46287.5 |
| carbohydrate abc transporter permease | CFBP5506_RS17735 | Not Available | Positive | 1006821 - 1007747 | 34103.7 |
| carbohydrate abc transporter permease | CFBP5506_RS17740 | Not Available | Positive | 1007758 - 1008588 | 30447.7 |
| abc transporter atp-binding protein | CFBP5506_RS17745 | Not Available | Positive | 1008591 - 1009673 | 39084.2 |
| nad-dependent epimerase/dehydratase family protein | CFBP5506_RS17750 | Not Available | Positive | 1009670 - 1010653 | 35852.7 |
| smp-30/gluconolactonase/lre family protein | CFBP5506_RS17755 | Not Available | Positive | 1010650 - 1012332 | 59818.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


