Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multicopper oxidase family protein | CFBP5506_RS17610 | Not Available | Negative | 981061 - 982410 | 49938.0 |
| tolc family protein | CFBP5506_RS17615 | Not Available | Negative | 982425 - 983900 | 52949.3 |
| hypothetical protein | CFBP5506_RS17620 | Not Available | Negative | 983897 - 984127 | 7911.25 |
| hypothetical protein | CFBP5506_RS17625 | Not Available | Negative | 984215 - 984628 | 14746.8 |
| acetyltransferase | CFBP5506_RS17630 | Not Available | Negative | 984752 - 985198 | 16457.5 |
| biotin synthase biob | CFBP5506_RS17635 | Not Available | Positive | 985431 - 986465 | 37577.2 |
| 8-amino-7-oxononanoate synthase | CFBP5506_RS17640 | Not Available | Positive | 986462 - 987607 | 40491.6 |
| dethiobiotin synthase | CFBP5506_RS17645 | Not Available | Positive | 987604 - 988239 | 23009.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CFBP5506_RS17650 | Not Available | Positive | 988236 - 989531 | 46755.9 |
| beta-ketoacyl-acp synthase iii | CFBP5506_RS17655 | Not Available | Positive | 989588 - 990574 | 34248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


