Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CFBP5506_RS17560 | Not Available | Positive | 971106 - 972704 | 55851.8 |
| pyrroline-5-carboxylate reductase | CFBP5506_RS17565 | Not Available | Negative | 972759 - 973541 | 27815.6 |
| lysr family transcriptional regulator | CFBP5506_RS17570 | Not Available | Negative | 973665 - 974516 | 30554.5 |
| mfs transporter | CFBP5506_RS17575 | Not Available | Positive | 974647 - 976167 | 53116.1 |
| duf535 family protein | CFBP5506_RS17580 | Not Available | Negative | 976198 - 977151 | 35985.7 |
| atp-binding protein | CFBP5506_RS17585 | Not Available | Negative | 977303 - 978466 | 42331.6 |
| response regulator | CFBP5506_RS17590 | Not Available | Negative | 978463 - 979161 | 25847.3 |
| phosphatase pap2 family protein | CFBP5506_RS17595 | Not Available | Positive | 979331 - 980164 | 30697.2 |
| copper-binding protein | CFBP5506_RS17600 | Not Available | Negative | 980223 - 980507 | 10291.9 |
| plastocyanin/azurin family copper-binding protein | CFBP5506_RS17605 | Not Available | Negative | 980532 - 981008 | 17224.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


