Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/glutamate racemase family protein | CFBP5506_RS17510 | Not Available | Negative | 960144 - 960830 | 24385.4 |
| transporter substrate-binding domain-containing protein | CFBP5506_RS17515 | Not Available | Negative | 960931 - 961776 | 30340.6 |
| lysr substrate-binding domain-containing protein | CFBP5506_RS17520 | Not Available | Positive | 961981 - 962880 | 33642.2 |
| methyl-accepting chemotaxis protein | CFBP5506_RS17525 | Not Available | Positive | 963203 - 965146 | 68854.6 |
| lysr family transcriptional regulator | CFBP5506_RS17530 | Not Available | Negative | 965329 - 966228 | 33041.7 |
| voc family protein | CFBP5506_RS17535 | Not Available | Positive | 966348 - 967280 | 34086.2 |
| hydrolase | CFBP5506_RS17540 | Not Available | Positive | 967422 - 968114 | 25384.2 |
| xapx domain-containing protein | CFBP5506_RS17545 | Not Available | Positive | 968188 - 968478 | 10336.8 |
| amidohydrolase | CFBP5506_RS17550 | Not Available | Positive | 968478 - 970460 | 72726.3 |
| doxx family protein | CFBP5506_RS17555 | Not Available | Positive | 970669 - 971109 | 15381.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


