Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | CFBP5506_RS17360 | Not Available | Positive | 927018 - 927446 | 16308.8 |
| carboxymuconolactone decarboxylase family protein | CFBP5506_RS17365 | Not Available | Positive | 927382 - 927792 | 14751.6 |
| sdr family oxidoreductase | CFBP5506_RS17370 | Not Available | Positive | 928064 - 928798 | 25177.4 |
| lysr family transcriptional regulator | CFBP5506_RS17375 | Not Available | Negative | 928783 - 929673 | 31838.2 |
| fic family protein | CFBP5506_RS17380 | Not Available | Negative | 930048 - 930446 | 15243.0 |
| potassium channel family protein | CFBP5506_RS17385 | Not Available | Negative | 930499 - 931302 | 30091.7 |
| bcct family transporter | CFBP5506_RS17390 | Not Available | Positive | 931535 - 933517 | 71615.7 |
| duf2254 domain-containing protein | CFBP5506_RS17395 | Not Available | Positive | 933596 - 934858 | 46061.1 |
| duf4394 domain-containing protein | CFBP5506_RS17400 | Not Available | Negative | 935139 - 935927 | 27425.0 |
| sigma-70 family rna polymerase sigma factor | CFBP5506_RS17405 | Not Available | Positive | 936112 - 936663 | 20775.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


