Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CFBP5506_RS13725 | Not Available | Negative | 81371 - 82339 | 35669.9 |
| abc transporter substrate-binding protein | CFBP5506_RS13730 | Not Available | Negative | 82582 - 84147 | 57611.5 |
| amidohydrolase family protein | CFBP5506_RS13735 | Not Available | Positive | 84309 - 85826 | 55980.3 |
| porin | CFBP5506_RS13740 | Not Available | Negative | 86023 - 87171 | 40324.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CFBP5506_RS13745 | Not Available | Negative | 87640 - 89814 | 79403.8 |
| 2-hydroxyacid dehydrogenase | CFBP5506_RS13750 | Not Available | Negative | 90046 - 90981 | 32904.5 |
| amino acid abc transporter atp-binding protein | CFBP5506_RS13755 | Not Available | Negative | 91005 - 91736 | 26851.8 |
| amino acid abc transporter permease | CFBP5506_RS13760 | Not Available | Negative | 91717 - 92376 | 24183.0 |
| amino acid abc transporter permease | CFBP5506_RS13765 | Not Available | Negative | 92373 - 93077 | 25551.9 |
| transporter substrate-binding domain-containing protein | CFBP5506_RS13770 | Not Available | Negative | 93144 - 93947 | 28584.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


