Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase small subunit nird | CFBP5506_RS17210 | Not Available | Positive | 897480 - 897815 | 11887.4 |
| nitrate reductase | CFBP5506_RS17215 | Not Available | Positive | 898030 - 900678 | 95525.3 |
| siroheme synthase cysg | CFBP5506_RS17220 | Not Available | Positive | 900650 - 902110 | 52471.4 |
| deor/glpr family dna-binding transcription regulator | CFBP5506_RS17225 | Not Available | Positive | 902263 - 903036 | 27800.3 |
| glycerol-3-phosphate dehydrogenase | CFBP5506_RS17230 | Not Available | Positive | 903145 - 904668 | 56545.2 |
| abc transporter atp-binding protein | CFBP5506_RS17235 | Not Available | Positive | 904705 - 905775 | 39084.1 |
| abc transporter atp-binding protein | CFBP5506_RS17240 | Not Available | Positive | 905788 - 906858 | 39255.3 |
| carbohydrate abc transporter permease | CFBP5506_RS17245 | Not Available | Positive | 906861 - 907727 | 32394.0 |
| carbohydrate abc transporter permease | CFBP5506_RS17250 | Not Available | Positive | 907731 - 908651 | 33938.7 |
| duf2160 domain-containing protein | CFBP5506_RS17255 | Not Available | Positive | 908654 - 908947 | 11052.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


