Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydro-lyase | CFBP5506_RS17160 | Not Available | Negative | 885624 - 886433 | 28918.6 |
| lamb/ycsf family protein | CFBP5506_RS17165 | Not Available | Negative | 886445 - 887212 | 26642.8 |
| nramp family divalent metal transporter | CFBP5506_RS17170 | Not Available | Negative | 887336 - 888577 | 43449.4 |
| gntr family transcriptional regulator | CFBP5506_RS17175 | Not Available | Positive | 888845 - 889510 | 24808.0 |
| antar domain-containing response regulator | CFBP5506_RS17180 | Not Available | Positive | 889612 - 890199 | 21809.7 |
| cmpa/nrta family abc transporter substrate-binding protein | CFBP5506_RS17185 | Not Available | Positive | 890235 - 891530 | 46330.8 |
| cmpa/nrta family abc transporter substrate-binding protein | CFBP5506_RS17190 | Not Available | Positive | 891911 - 893203 | 46719.0 |
| nitrate abc transporter permease | CFBP5506_RS17195 | Not Available | Positive | 893317 - 894210 | 32105.7 |
| abc transporter atp-binding protein | CFBP5506_RS17200 | Not Available | Positive | 894224 - 895021 | 29613.2 |
| nitrite reductase large subunit nirb | CFBP5506_RS17205 | Not Available | Positive | 895027 - 897474 | 88867.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


