Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication protein repc | CFBP5506_RS17110 | Not Available | Positive | 872741 - 874018 | 46629.2 |
| hypothetical protein | CFBP5506_RS17115 | Not Available | Positive | 874481 - 874693 | 7789.99 |
| hypothetical protein | CFBP5506_RS17120 | Not Available | Positive | 874763 - 875047 | 9913.92 |
| low temperature requirement protein a | CFBP5506_RS17125 | Not Available | Positive | 875103 - 876299 | 43664.5 |
| glycosyl transferase family protein | CFBP5506_RS17130 | Not Available | Negative | 876307 - 877776 | 53565.8 |
| tonb-dependent receptor plug domain-containing protein | CFBP5506_RS17135 | Not Available | Positive | 877923 - 880031 | 77138.5 |
| redox-sensitive transcriptional activator soxr | CFBP5506_RS17140 | Not Available | Positive | 880191 - 880646 | 17002.6 |
| alpha-amylase | CFBP5506_RS17145 | Not Available | Negative | 880677 - 882164 | 55821.0 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | CFBP5506_RS17150 | Not Available | Negative | 882276 - 884009 | 61443.7 |
| 5-oxoprolinase/urea amidolyase family protein | CFBP5506_RS17155 | Not Available | Negative | 884027 - 885616 | 55919.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


