Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 849619 - 852571 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 853145 - 853220 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 853315 - 853391 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 853611 - 855095 | Not Available |
| histidine utilization repressor | CFBP5506_RS17030 | Not Available | Negative | 855658 - 856404 | 27123.4 |
| formimidoylglutamate deiminase | CFBP5506_RS17035 | Not Available | Negative | 856435 - 857781 | 47868.9 |
| imidazolonepropionase | CFBP5506_RS17040 | Not Available | Positive | 857923 - 859155 | 43684.2 |
| histidine ammonia-lyase | CFBP5506_RS17045 | Not Available | Positive | 859152 - 860696 | 53493.9 |
| fic family protein | CFBP5506_RS17050 | Not Available | Negative | 860748 - 860894 | 5161.3 |
| n-formylglutamate deformylase | CFBP5506_RS17055 | Not Available | Positive | 860919 - 861719 | 29580.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


