Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CFBP5506_RS16960 | Not Available | Negative | 842759 - 843655 | 33346.7 |
| 4-oxalomesaconate tautomerase | CFBP5506_RS16965 | Not Available | Positive | 843761 - 844843 | 37614.0 |
| abc transporter substrate-binding protein | CFBP5506_RS16970 | Not Available | Positive | 844892 - 845893 | 35531.0 |
| abc transporter atp-binding protein | CFBP5506_RS16975 | Not Available | Positive | 845903 - 846724 | 30350.1 |
| abc transporter permease | CFBP5506_RS16980 | Not Available | Positive | 846711 - 847487 | 27782.5 |
| fic family protein | CFBP5506_RS16985 | Not Available | Negative | 847648 - 848028 | 14243.1 |
| fic family protein | CFBP5506_RS16990 | Not Available | Positive | 848156 - 848641 | 18044.5 |
| hypothetical protein | CFBP5506_RS16995 | Not Available | Positive | 848653 - 848787 | 4902.53 |
| Trna-met | Not Available | Not Available | Positive | 848942 - 849018 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 849119 - 849233 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


