Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | CFBP5506_RS16910 | Not Available | Positive | 831599 - 832771 | 44456.1 |
| abc transporter atp-binding protein | CFBP5506_RS16915 | Not Available | Positive | 832785 - 833894 | 40820.8 |
| hypothetical protein | CFBP5506_RS16920 | Not Available | Positive | 833914 - 834618 | 25390.7 |
| abc transporter substrate-binding protein | CFBP5506_RS16925 | Not Available | Positive | 834667 - 835947 | 45880.7 |
| duf2264 domain-containing protein | CFBP5506_RS16930 | Not Available | Positive | 836017 - 837882 | 69913.1 |
| acyltransferase | CFBP5506_RS16935 | Not Available | Positive | 837888 - 839555 | 60751.3 |
| alpha-hydroxy acid oxidase | CFBP5506_RS16940 | Not Available | Positive | 839606 - 840751 | 42216.0 |
| hypothetical protein | CFBP5506_RS16945 | Not Available | Negative | 840800 - 841135 | 11974.9 |
| helix-turn-helix domain-containing gnat family n-acetyltransferase | CFBP5506_RS16950 | Not Available | Positive | 841375 - 842316 | 34458.0 |
| fic family protein | CFBP5506_RS16955 | Not Available | Negative | 842302 - 842544 | 9536.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


