Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | CFBP5506_RS16860 | Not Available | Positive | 818513 - 820918 | 89423.9 |
| transglutaminase family protein | CFBP5506_RS16865 | Not Available | Positive | 820923 - 821801 | 32230.7 |
| vwa domain-containing protein | CFBP5506_RS16870 | Not Available | Positive | 821970 - 823208 | 44065.0 |
| abc-f family atp-binding cassette domain-containing protein | CFBP5506_RS16875 | Not Available | Positive | 823334 - 824956 | 60199.9 |
| 2-hydroxyacid dehydrogenase | CFBP5506_RS16880 | Not Available | Positive | 825017 - 826027 | 36479.3 |
| fadr/gntr family transcriptional regulator | CFBP5506_RS16885 | Not Available | Positive | 826173 - 826925 | 27637.9 |
| carbohydrate-binding protein | CFBP5506_RS16890 | Not Available | Negative | 826982 - 827779 | 29324.7 |
| heparinase ii/iii family protein | CFBP5506_RS16895 | Not Available | Negative | 827790 - 829577 | 66093.1 |
| carbohydrate abc transporter permease | CFBP5506_RS16900 | Not Available | Positive | 829804 - 830754 | 35604.0 |
| carbohydrate abc transporter permease | CFBP5506_RS16905 | Not Available | Positive | 830758 - 831594 | 31682.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


