Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase family protein | CFBP5506_RS16810 | Not Available | Positive | 804574 - 805770 | 43786.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CFBP5506_RS16815 | Not Available | Positive | 805767 - 806723 | 33303.7 |
| iron-containing alcohol dehydrogenase | CFBP5506_RS16820 | Not Available | Positive | 806720 - 807847 | 39001.0 |
| fadr/gntr family transcriptional regulator | CFBP5506_RS16825 | Not Available | Negative | 807895 - 808602 | 26514.7 |
| four-carbon acid sugar kinase family protein | CFBP5506_RS16830 | Not Available | Negative | 808607 - 809647 | 35206.6 |
| polysaccharide deacetylase family protein | CFBP5506_RS16835 | Not Available | Negative | 809880 - 812123 | 81924.3 |
| acyl-coa thioesterase | CFBP5506_RS16840 | Not Available | Negative | 812295 - 812684 | 14265.2 |
| hypothetical protein | CFBP5506_RS16845 | Not Available | Positive | 812858 - 813052 | 7201.63 |
| abc transporter atp-binding protein/permease | CFBP5506_RS16850 | Not Available | Negative | 813084 - 814892 | 65992.9 |
| duf2126 domain-containing protein | CFBP5506_RS16855 | Not Available | Positive | 815185 - 818511 | 123259.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


