Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit gamma | CFBP5506_RS13675 | Not Available | Negative | 71909 - 72388 | 17342.8 |
| lysr family transcriptional regulator | CFBP5506_RS13680 | Not Available | Negative | 72493 - 73428 | 34644.0 |
| aspartate/glutamate racemase family protein | CFBP5506_RS13685 | Not Available | Negative | 73530 - 74252 | 25418.7 |
| flavin reductase family protein | CFBP5506_RS13690 | Not Available | Negative | 74274 - 74903 | 23496.1 |
| gntr family transcriptional regulator | CFBP5506_RS13695 | Not Available | Positive | 75033 - 75710 | 25250.3 |
| abc transporter atp-binding protein | CFBP5506_RS13700 | Not Available | Negative | 75718 - 76740 | 37325.0 |
| abc transporter atp-binding protein | CFBP5506_RS13705 | Not Available | Negative | 76737 - 77720 | 35068.8 |
| amidohydrolase family protein | CFBP5506_RS13710 | Not Available | Negative | 77713 - 79206 | 53922.6 |
| amidohydrolase family protein | CFBP5506_RS13715 | Not Available | Negative | 79206 - 80399 | 42722.8 |
| abc transporter permease | CFBP5506_RS13720 | Not Available | Negative | 80405 - 81352 | 34171.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


