Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CFBP5506_RS16660 | Not Available | Positive | 769619 - 770530 | 33237.5 |
| hypothetical protein | CFBP5506_RS16665 | Not Available | Positive | 770776 - 771039 | 9047.77 |
| phosphoethanolamine transferase | CFBP5506_RS16670 | Not Available | Positive | 771210 - 772877 | 61241.6 |
| response regulator transcription factor | CFBP5506_RS16675 | Not Available | Positive | 772943 - 773596 | 23862.7 |
| sensor histidine kinase | CFBP5506_RS16680 | Not Available | Positive | 773619 - 774956 | 47980.8 |
| mfs transporter | CFBP5506_RS16685 | Not Available | Negative | 775019 - 776323 | 47132.0 |
| rhe_pe00001 family protein | CFBP5506_RS16690 | Not Available | Positive | 776615 - 777724 | 41189.3 |
| helix-turn-helix domain-containing protein | CFBP5506_RS16695 | Not Available | Positive | 777976 - 778206 | 8191.73 |
| adenylate/guanylate cyclase domain-containing protein | CFBP5506_RS16700 | Not Available | Positive | 778437 - 779687 | 45949.7 |
| inositol 2-dehydrogenase | CFBP5506_RS16705 | Not Available | Positive | 779901 - 780893 | 35121.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


