Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impact family protein | CFBP5506_RS16560 | Not Available | Positive | 749167 - 749754 | 21007.0 |
| pseudouridine synthase | CFBP5506_RS16565 | Not Available | Positive | 749824 - 750492 | 24778.9 |
| class i sam-dependent methyltransferase | CFBP5506_RS16570 | Not Available | Positive | 750500 - 751126 | 22804.8 |
| hypothetical protein | CFBP5506_RS16575 | Not Available | Negative | 751127 - 751312 | 7323.92 |
| pqq-dependent sugar dehydrogenase | CFBP5506_RS16580 | Not Available | Positive | 751498 - 752724 | 43478.3 |
| dna topoisomerase ib | CFBP5506_RS16585 | Not Available | Positive | 752829 - 753845 | 37531.4 |
| response regulator transcription factor | CFBP5506_RS16590 | Not Available | Negative | 753952 - 754674 | 27203.3 |
| gaf domain-containing sensor histidine kinase | CFBP5506_RS16595 | Not Available | Negative | 754676 - 755911 | 44664.3 |
| abc transporter substrate-binding protein | CFBP5506_RS16600 | Not Available | Positive | 756217 - 757233 | 35682.4 |
| atp-binding cassette domain-containing protein | CFBP5506_RS16605 | Not Available | Positive | 757326 - 758789 | 52867.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


