Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | CFBP5506_RS16360 | Not Available | Positive | 700100 - 700993 | 30687.0 |
| aldose 1-epimerase | CFBP5506_RS16365 | Not Available | Positive | 701153 - 702136 | 35807.1 |
| lrp/asnc family transcriptional regulator | CFBP5506_RS16370 | Not Available | Negative | 702155 - 702616 | 17579.4 |
| aspartate/glutamate racemase family protein | CFBP5506_RS16375 | Not Available | Positive | 702784 - 703497 | 25430.7 |
| class ii glutamine amidotransferase | CFBP5506_RS16380 | Not Available | Positive | 703498 - 704268 | 27888.2 |
| glycogen/starch/alpha-glucan phosphorylase | CFBP5506_RS16385 | Not Available | Positive | 704753 - 707215 | 91861.9 |
| 1,4-alpha-glucan branching protein glgb | CFBP5506_RS16390 | Not Available | Positive | 707215 - 709422 | 83866.0 |
| glucose-1-phosphate adenylyltransferase | CFBP5506_RS16395 | Not Available | Positive | 709444 - 710706 | 46985.8 |
| glycogen synthase glga | CFBP5506_RS16400 | Not Available | Positive | 710712 - 712154 | 51660.1 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | CFBP5506_RS16405 | Not Available | Positive | 712159 - 713787 | 57927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


