Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3597 domain-containing protein | CFBP5506_RS16310 | Not Available | Positive | 689899 - 690315 | 14240.8 |
| hypothetical protein | CFBP5506_RS16315 | Not Available | Positive | 690335 - 690523 | 7125.35 |
| cytochrome bd-i oxidase subunit cydx | CFBP5506_RS16320 | Not Available | Negative | 690614 - 690736 | 4707.88 |
| cytochrome d ubiquinol oxidase subunit ii | CFBP5506_RS16325 | Not Available | Negative | 690762 - 691919 | 42014.0 |
| cytochrome ubiquinol oxidase subunit i | CFBP5506_RS16330 | Not Available | Negative | 691926 - 693503 | 58111.4 |
| thiol reductant abc exporter subunit cydc | CFBP5506_RS16335 | Not Available | Negative | 693570 - 695261 | 59182.3 |
| thiol reductant abc exporter subunit cydd | CFBP5506_RS16340 | Not Available | Negative | 695258 - 697045 | 62825.3 |
| gbsr/marr family transcriptional regulator | CFBP5506_RS16345 | Not Available | Negative | 697063 - 697641 | 21964.5 |
| l-idonate 5-dehydrogenase | CFBP5506_RS16350 | Not Available | Negative | 698008 - 699039 | 36331.0 |
| sdr family oxidoreductase | CFBP5506_RS16355 | Not Available | Positive | 699259 - 700014 | 26243.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


