Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CFBP5506_RS13625 | Not Available | Negative | 58087 - 59211 | 41192.9 |
| abc transporter permease | CFBP5506_RS13630 | Not Available | Negative | 59221 - 60207 | 36093.3 |
| abc transporter substrate-binding protein | CFBP5506_RS13635 | Not Available | Negative | 60330 - 62279 | 72422.9 |
| fadr/gntr family transcriptional regulator | CFBP5506_RS13640 | Not Available | Positive | 62581 - 63300 | 26637.5 |
| smp-30/gluconolactonase/lre family protein | CFBP5506_RS13645 | Not Available | Positive | 63359 - 64240 | 31488.2 |
| dihydrodipicolinate synthase family protein | CFBP5506_RS13650 | Not Available | Positive | 64272 - 65168 | 31504.7 |
| ofa family mfs transporter | CFBP5506_RS13655 | Not Available | Negative | 65285 - 66937 | 57869.8 |
| formate dehydrogenase subunit delta | CFBP5506_RS13660 | Not Available | Negative | 67053 - 67397 | 12343.7 |
| formate dehydrogenase subunit alpha | CFBP5506_RS13665 | Not Available | Negative | 67469 - 70351 | 105437.0 |
| formate dehydrogenase beta subunit | CFBP5506_RS13670 | Not Available | Negative | 70356 - 71912 | 54915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


