Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | CFBP5506_RS16210 | Not Available | Negative | 670278 - 671285 | 36689.4 |
| abc transporter substrate-binding protein | CFBP5506_RS16215 | Not Available | Negative | 671347 - 672951 | 59221.1 |
| m24 family metallopeptidase | CFBP5506_RS16220 | Not Available | Negative | 673071 - 674258 | 42938.6 |
| sdr family oxidoreductase | CFBP5506_RS16225 | Not Available | Negative | 674812 - 675561 | 26663.8 |
| nucleoside 2-deoxyribosyltransferase | CFBP5506_RS16230 | Not Available | Negative | 675558 - 676172 | 22042.5 |
| ribonuclease d | CFBP5506_RS16235 | Not Available | Positive | 676350 - 676976 | 23100.5 |
| hypothetical protein | CFBP5506_RS16240 | Not Available | Positive | 677059 - 678285 | 43984.3 |
| hypothetical protein | CFBP5506_RS16245 | Not Available | Positive | 678335 - 678652 | 11012.6 |
| hypothetical protein | CFBP5506_RS16250 | Not Available | Positive | 678905 - 680446 | 53905.1 |
| 30s ribosomal protein s1 | CFBP5506_RS16255 | Not Available | Negative | 680543 - 682243 | 62255.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


