Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CFBP5506_RS16160 | Not Available | Negative | 659677 - 660462 | 28091.3 |
| abc transporter substrate-binding protein | CFBP5506_RS16165 | Not Available | Negative | 660488 - 661696 | 42915.8 |
| lysr family transcriptional regulator | CFBP5506_RS16170 | Not Available | Positive | 661909 - 662826 | 34593.8 |
| llm class flavin-dependent oxidoreductase | CFBP5506_RS16175 | Not Available | Positive | 662960 - 663982 | 37806.5 |
| mandelate racemase/muconate lactonizing enzyme family protein | CFBP5506_RS16180 | Not Available | Negative | 664029 - 665147 | 40952.7 |
| gntr family transcriptional regulator | CFBP5506_RS16185 | Not Available | Positive | 665379 - 666053 | 24628.6 |
| mannitol dehydrogenase family protein | CFBP5506_RS16190 | Not Available | Positive | 666162 - 667631 | 54574.3 |
| atp-binding cassette domain-containing protein | CFBP5506_RS16195 | Not Available | Negative | 667682 - 668527 | 30740.5 |
| abc transporter atp-binding protein | CFBP5506_RS16200 | Not Available | Negative | 668524 - 669363 | 30187.9 |
| abc transporter permease subunit | CFBP5506_RS16205 | Not Available | Negative | 669367 - 670281 | 32862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


