Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthase | CFBP5506_RS16060 | Not Available | Negative | 639664 - 640710 | 38054.1 |
| flavohemoglobin expression-modulating qegla motif protein | CFBP5506_RS16065 | Not Available | Negative | 640721 - 642595 | 69276.9 |
| n-formylglutamate amidohydrolase | CFBP5506_RS16070 | Not Available | Negative | 642592 - 643422 | 31335.8 |
| hypothetical protein | CFBP5506_RS16075 | Not Available | Positive | 643713 - 643934 | 8841.22 |
| type 1 glutamine amidotransferase domain-containing protein | CFBP5506_RS16080 | Not Available | Positive | 643953 - 644513 | 20511.4 |
| ppc domain-containing dna-binding protein | CFBP5506_RS16085 | Not Available | Positive | 644575 - 645015 | 16001.0 |
| tigr02587 family membrane protein | CFBP5506_RS16090 | Not Available | Positive | 645070 - 645930 | 31445.9 |
| tigr02588 family protein | CFBP5506_RS16095 | Not Available | Positive | 645938 - 646348 | 15222.8 |
| nad(p)/fad-dependent oxidoreductase | CFBP5506_RS16100 | Not Available | Positive | 646368 - 647594 | 44059.7 |
| mgtc/sapb family protein | CFBP5506_RS16105 | Not Available | Negative | 647601 - 648056 | 15981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


