Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CFBP5506_RS16010 | Not Available | Negative | 627071 - 627865 | 28904.7 |
| nepr family anti-sigma factor | CFBP5506_RS16015 | Not Available | Positive | 628004 - 628210 | 7694.92 |
| rna polymerase sigma factor | CFBP5506_RS16020 | Not Available | Positive | 628210 - 628776 | 21009.9 |
| lrp/asnc ligand binding domain-containing protein | CFBP5506_RS16025 | Not Available | Negative | 628836 - 629306 | 17628.4 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | CFBP5506_RS16030 | Not Available | Positive | 629482 - 633156 | 130965.0 |
| aldehyde dehydrogenase family protein | CFBP5506_RS16035 | Not Available | Negative | 633289 - 634818 | 53864.4 |
| lysr family transcriptional regulator | CFBP5506_RS16040 | Not Available | Positive | 635019 - 635921 | 33524.3 |
| dmt family transporter | CFBP5506_RS16045 | Not Available | Negative | 635951 - 636838 | 32284.4 |
| udp-glucose dehydrogenase family protein | CFBP5506_RS16050 | Not Available | Positive | 637221 - 638552 | 47647.1 |
| nad-dependent epimerase | CFBP5506_RS16055 | Not Available | Positive | 638639 - 639661 | 37856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


