Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | CFBP5506_RS15960 | Not Available | Negative | 614594 - 615871 | 45197.1 |
| dead/deah box helicase | CFBP5506_RS15965 | Not Available | Positive | 616263 - 618110 | 67831.8 |
| saccharopine dehydrogenase family protein | CFBP5506_RS15970 | Not Available | Negative | 618456 - 619694 | 45454.5 |
| carboxynorspermidine decarboxylase | CFBP5506_RS15975 | Not Available | Negative | 619755 - 620852 | 41230.0 |
| duf883 family protein | CFBP5506_RS15980 | Not Available | Positive | 621132 - 621476 | 11930.1 |
| hypothetical protein | CFBP5506_RS15985 | Not Available | Positive | 621481 - 621918 | 15062.2 |
| udp-glucose 4-epimerase gale | CFBP5506_RS15990 | Not Available | Positive | 622100 - 623083 | 36008.3 |
| prc-barrel domain-containing protein | CFBP5506_RS15995 | Not Available | Negative | 623187 - 623762 | 19240.6 |
| sensor histidine kinase | CFBP5506_RS16000 | Not Available | Positive | 623998 - 625722 | 63726.1 |
| sensor histidine kinase | CFBP5506_RS16005 | Not Available | Negative | 625983 - 626975 | 37619.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


