Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 597802 - 600754 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 601328 - 601403 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 601498 - 601574 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 601794 - 603278 | Not Available |
| m23 family metallopeptidase | CFBP5506_RS15930 | Not Available | Positive | 604003 - 605949 | 70277.7 |
| atp-dependent chaperone clpb | CFBP5506_RS15935 | Not Available | Negative | 606019 - 608643 | 96245.0 |
| duf4167 domain-containing protein | CFBP5506_RS15940 | Not Available | Negative | 608997 - 609779 | 29100.9 |
| peptide chain release factor n(5)-glutamine methyltransferase | CFBP5506_RS15945 | Not Available | Negative | 610176 - 611045 | 31281.4 |
| peptide chain release factor 1 | CFBP5506_RS15950 | Not Available | Negative | 611042 - 612121 | 39966.4 |
| phosphoenolpyruvate--protein phosphotransferase | CFBP5506_RS15955 | Not Available | Negative | 612151 - 614418 | 83813.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


