Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone oxidoreductase family protein | CFBP5506_RS15815 | Not Available | Negative | 577876 - 578451 | 19821.9 |
| is3 family transposase | CFBP5506_RS15820 | Not Available | Positive | 578583 - 579685 | 42346.6 |
| wadjet anti-phage system protein jetd domain-containing protein | CFBP5506_RS15825 | Not Available | Negative | 579910 - 581142 | 45116.0 |
| sbcc/mukb-like walker b domain-containing protein | CFBP5506_RS15830 | Not Available | Negative | 581139 - 584573 | 129565.0 |
| duf4194 domain-containing protein | CFBP5506_RS15835 | Not Available | Negative | 584570 - 585220 | 24208.2 |
| wadjet anti-phage system protein jeta family protein | CFBP5506_RS15840 | Not Available | Negative | 585210 - 586772 | 58606.8 |
| hypothetical protein | CFBP5506_RS21830 | Not Available | Negative | 586860 - 587198 | 12086.7 |
| hypothetical protein | CFBP5506_RS15845 | Not Available | Negative | 587096 - 587395 | 11120.6 |
| sdr family oxidoreductase | CFBP5506_RS15850 | Not Available | Negative | 587405 - 587680 | 9861.85 |
| fic family protein | CFBP5506_RS15855 | Not Available | Positive | 587808 - 587924 | 3936.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


