Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CFBP5506_RS15765 | Not Available | Positive | 567974 - 568687 | 25271.5 |
| hlyd family secretion protein | CFBP5506_RS15770 | Not Available | Positive | 568692 - 569612 | 32847.8 |
| lysr family transcriptional regulator | CFBP5506_RS15775 | Not Available | Negative | 569963 - 570865 | 32470.1 |
| sdr family oxidoreductase | CFBP5506_RS15780 | Not Available | Positive | 570985 - 571722 | 25452.8 |
| sdr family oxidoreductase | CFBP5506_RS15785 | Not Available | Positive | 571793 - 572695 | 31577.5 |
| nadp-dependent oxidoreductase | CFBP5506_RS15790 | Not Available | Negative | 573181 - 574182 | 36067.3 |
| alpha/beta fold hydrolase | CFBP5506_RS15795 | Not Available | Negative | 574233 - 575102 | 31376.1 |
| alkene reductase | CFBP5506_RS15800 | Not Available | Negative | 575212 - 576294 | 38767.6 |
| sdr family nad(p)-dependent oxidoreductase | CFBP5506_RS15805 | Not Available | Negative | 576347 - 577135 | 27442.0 |
| tetr/acrr family transcriptional regulator | CFBP5506_RS15810 | Not Available | Positive | 577243 - 577806 | 20311.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


