Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | CFBP5506_RS15615 | Not Available | Negative | 537076 - 537215 | 5274.24 |
| plp-dependent aminotransferase family protein | CFBP5506_RS15620 | Not Available | Negative | 537256 - 538581 | 47616.5 |
| abc transporter substrate-binding protein | CFBP5506_RS15625 | Not Available | Positive | 538682 - 539644 | 36109.1 |
| abc transporter substrate-binding protein | CFBP5506_RS15630 | Not Available | Positive | 539702 - 540592 | 31358.6 |
| amino acid abc transporter permease | CFBP5506_RS15635 | Not Available | Positive | 540589 - 541512 | 33657.5 |
| amino acid abc transporter atp-binding protein | CFBP5506_RS15640 | Not Available | Positive | 541509 - 542288 | 28561.8 |
| m20 aminoacylase family protein | CFBP5506_RS15645 | Not Available | Positive | 542359 - 543540 | 42662.8 |
| fic family protein | CFBP5506_RS15650 | Not Available | Positive | 543704 - 543840 | 5052.32 |
| multidrug efflux rnd transporter permease subunit | CFBP5506_RS15655 | Not Available | Negative | 543920 - 547000 | 109703.0 |
| efflux rnd transporter periplasmic adaptor subunit | CFBP5506_RS15660 | Not Available | Negative | 547015 - 548181 | 41060.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


