Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | CFBP5506_RS15320 | Not Available | Negative | 472094 - 472414 | 12263.3 |
| sarcosine oxidase subunit beta family protein | CFBP5506_RS15325 | Not Available | Negative | 472455 - 473708 | 45417.0 |
| glxa family transcriptional regulator | CFBP5506_RS15330 | Not Available | Positive | 473795 - 474841 | 38443.4 |
| cytochrome c oxidase subunit iv family protein | CFBP5506_RS15335 | Not Available | Negative | 474858 - 475190 | 12489.9 |
| heme-copper oxidase subunit iii family protein | CFBP5506_RS15340 | Not Available | Negative | 475205 - 475930 | 27144.3 |
| cytochrome c oxidase subunit 3 | CFBP5506_RS15345 | Not Available | Negative | 475943 - 476647 | 25461.6 |
| cytochrome c oxidase subunit i | CFBP5506_RS15350 | Not Available | Negative | 476644 - 478422 | 66080.1 |
| cytochrome c oxidase subunit ii | CFBP5506_RS15355 | Not Available | Negative | 478478 - 479293 | 30149.4 |
| duf2189 domain-containing protein | CFBP5506_RS15360 | Not Available | Negative | 479560 - 480375 | 29123.3 |
| hypothetical protein | CFBP5506_RS15365 | Not Available | Negative | 480546 - 481508 | 33564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


