Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spore coat u domain-containing protein | CFBP5506_RS13525 | Not Available | Positive | 34238 - 35188 | 32415.4 |
| abc-f family atp-binding cassette domain-containing protein | CFBP5506_RS13530 | Not Available | Negative | 35204 - 36787 | 56332.2 |
| abc transporter atp-binding protein | CFBP5506_RS13535 | Not Available | Negative | 36967 - 38769 | 66015.8 |
| gcg_crpn prefix-to-repeats domain-containing protein | CFBP5506_RS13540 | Not Available | Negative | 39410 - 39727 | 12733.0 |
| csbd family protein | CFBP5506_RS13545 | Not Available | Positive | 39910 - 40113 | 8221.51 |
| extracellular solute-binding protein | CFBP5506_RS13550 | Not Available | Positive | 40626 - 41777 | 41184.7 |
| abc transporter permease | CFBP5506_RS13555 | Not Available | Positive | 41810 - 42658 | 30826.5 |
| abc transporter permease | CFBP5506_RS13560 | Not Available | Positive | 42660 - 43484 | 29952.5 |
| abc transporter atp-binding protein | CFBP5506_RS13565 | Not Available | Positive | 43494 - 44528 | 37625.3 |
| glycerophosphodiester phosphodiesterase | CFBP5506_RS13570 | Not Available | Positive | 44530 - 45366 | 30133.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


