Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFBP5506_RS15220 | Not Available | Positive | 447929 - 448126 | 6683.97 |
| laci family dna-binding transcriptional regulator | CFBP5506_RS15225 | Not Available | Positive | 448219 - 449205 | 35609.0 |
| metallophosphoesterase family protein | CFBP5506_RS15230 | Not Available | Negative | 449238 - 450923 | 62031.6 |
| inositol monophosphatase family protein | CFBP5506_RS15235 | Not Available | Negative | 451076 - 451915 | 29271.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CFBP5506_RS15240 | Not Available | Positive | 452257 - 454218 | 72586.1 |
| prc-barrel domain-containing protein | CFBP5506_RS15245 | Not Available | Positive | 454475 - 454771 | 10521.3 |
| sdr family oxidoreductase | CFBP5506_RS15250 | Not Available | Negative | 454868 - 455593 | 24841.0 |
| fggy-family carbohydrate kinase | CFBP5506_RS15255 | Not Available | Negative | 455653 - 457263 | 55999.4 |
| sdr family oxidoreductase | CFBP5506_RS15260 | Not Available | Negative | 457354 - 458085 | 26331.9 |
| abc transporter permease | CFBP5506_RS15265 | Not Available | Negative | 458125 - 459102 | 33093.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


