Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | CFBP5506_RS15170 | Not Available | Negative | 433129 - 439050 | 207271.0 |
| lysr substrate-binding domain-containing protein | CFBP5506_RS15175 | Not Available | Positive | 439316 - 440176 | 31399.8 |
| duf488 domain-containing protein | CFBP5506_RS15180 | Not Available | Positive | 440291 - 440599 | 11526.8 |
| laci family dna-binding transcriptional regulator | CFBP5506_RS15185 | Not Available | Negative | 440536 - 441564 | 37596.1 |
| gfo/idh/moca family protein | CFBP5506_RS15190 | Not Available | Positive | 441704 - 442738 | 37234.7 |
| sugar phosphate isomerase/epimerase family protein | CFBP5506_RS15195 | Not Available | Positive | 442751 - 443653 | 33750.8 |
| abc transporter substrate-binding protein | CFBP5506_RS15200 | Not Available | Positive | 443716 - 444948 | 44836.5 |
| carbohydrate abc transporter permease | CFBP5506_RS15205 | Not Available | Positive | 445060 - 445962 | 33426.0 |
| carbohydrate abc transporter permease | CFBP5506_RS15210 | Not Available | Positive | 445959 - 446786 | 30600.2 |
| abc transporter atp-binding protein | CFBP5506_RS15215 | Not Available | Positive | 446783 - 447868 | 38789.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


