Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condensation domain-containing protein | CFBP5506_RS15120 | Not Available | Negative | 416484 - 417830 | 50227.7 |
| amino acid adenylation domain-containing protein | CFBP5506_RS15125 | Not Available | Negative | 417891 - 422339 | 161267.0 |
| isochorismate synthase menf | CFBP5506_RS15130 | Not Available | Positive | 422421 - 423596 | 42778.8 |
| (2,3-dihydroxybenzoyl)adenylate synthase | CFBP5506_RS15135 | Not Available | Positive | 423615 - 425240 | 59186.9 |
| isochorismatase | CFBP5506_RS15140 | Not Available | Positive | 425336 - 426205 | 32217.9 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | CFBP5506_RS15145 | Not Available | Positive | 426219 - 426974 | 26394.0 |
| 4'-phosphopantetheinyl transferase family protein | CFBP5506_RS15150 | Not Available | Positive | 427005 - 427718 | 26146.1 |
| phox family protein | CFBP5506_RS15155 | Not Available | Positive | 427845 - 429758 | 69414.9 |
| hlyd family type i secretion periplasmic adaptor subunit | CFBP5506_RS15160 | Not Available | Negative | 429964 - 431268 | 48192.1 |
| type i secretion system permease/atpase | CFBP5506_RS15165 | Not Available | Negative | 431271 - 433022 | 62440.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


