Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CFBP5506_RS15070 | Not Available | Negative | 403658 - 405757 | 76856.2 |
| iclr family transcriptional regulator | CFBP5506_RS15075 | Not Available | Positive | 406028 - 406804 | 27165.3 |
| ntaa/dmoa family fmn-dependent monooxygenase | CFBP5506_RS15080 | Not Available | Negative | 406807 - 408108 | 47207.0 |
| abc transporter atp-binding protein | CFBP5506_RS15085 | Not Available | Positive | 408323 - 409123 | 29015.3 |
| feccd family abc transporter permease | CFBP5506_RS15090 | Not Available | Positive | 409120 - 410133 | 35079.9 |
| feccd family abc transporter permease | CFBP5506_RS15095 | Not Available | Positive | 410130 - 411194 | 36514.0 |
| abc transporter substrate-binding protein | CFBP5506_RS15100 | Not Available | Positive | 411218 - 412171 | 33653.6 |
| siderophore-interacting protein | CFBP5506_RS15105 | Not Available | Positive | 412393 - 413232 | 30690.3 |
| phosphopantetheine-binding protein | CFBP5506_RS15110 | Not Available | Positive | 413225 - 413503 | 10385.6 |
| condensation domain-containing protein | CFBP5506_RS15115 | Not Available | Positive | 413567 - 416404 | 102740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


