Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | CFBP5506_RS13475 | Not Available | Negative | 20479 - 21969 | 53345.6 |
| substrate-binding domain-containing protein | CFBP5506_RS13480 | Not Available | Negative | 22087 - 23064 | 33989.3 |
| laci family dna-binding transcriptional regulator | CFBP5506_RS13485 | Not Available | Positive | 23303 - 24382 | 39670.2 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CFBP5506_RS13490 | Not Available | Negative | 24431 - 25759 | 49090.8 |
| tetratricopeptide repeat protein | CFBP5506_RS13495 | Not Available | Positive | 26016 - 26354 | 12256.9 |
| type b chloramphenicol o-acetyltransferase | CFBP5506_RS13500 | Not Available | Negative | 26486 - 27121 | 23628.9 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | CFBP5506_RS13505 | Not Available | Negative | 27445 - 30234 | 100619.0 |
| spore coat u domain-containing protein | CFBP5506_RS13510 | Not Available | Positive | 30593 - 31090 | 16530.3 |
| molecular chaperone | CFBP5506_RS13515 | Not Available | Positive | 31112 - 31831 | 24978.0 |
| fimbria/pilus outer membrane usher protein | CFBP5506_RS13520 | Not Available | Positive | 31803 - 34241 | 86852.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


