Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | CFBP5506_RS14770 | Not Available | Positive | 336962 - 338878 | 70221.7 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | CFBP5506_RS14775 | Not Available | Positive | 338875 - 340701 | 65909.6 |
| myo-inosose-2 dehydratase | CFBP5506_RS14780 | Not Available | Positive | 340703 - 341611 | 32724.0 |
| 5-deoxy-glucuronate isomerase | CFBP5506_RS14785 | Not Available | Positive | 341757 - 342569 | 29986.1 |
| gfo/idh/moca family protein | CFBP5506_RS14790 | Not Available | Positive | 342807 - 343934 | 41210.4 |
| 2-hydroxyacid dehydrogenase | CFBP5506_RS14795 | Not Available | Negative | 344069 - 345031 | 34369.6 |
| laci family dna-binding transcriptional regulator | CFBP5506_RS14800 | Not Available | Negative | 345440 - 346462 | 36650.0 |
| marr family winged helix-turn-helix transcriptional regulator | CFBP5506_RS14805 | Not Available | Negative | 346595 - 347104 | 18008.5 |
| creatininase family protein | CFBP5506_RS14810 | Not Available | Positive | 347184 - 347984 | 28985.7 |
| cobw family gtp-binding protein | CFBP5506_RS14815 | Not Available | Positive | 348098 - 349225 | 42137.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


