Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CFBP5506_RS14720 | Not Available | Positive | 327234 - 328082 | 30476.2 |
| m14 family metallopeptidase | CFBP5506_RS14725 | Not Available | Positive | 328088 - 329821 | 64452.8 |
| hypothetical protein | CFBP5506_RS14730 | Not Available | Negative | 329850 - 330221 | 13524.5 |
| abc transporter substrate-binding protein | CFBP5506_RS14735 | Not Available | Positive | 330565 - 331737 | 41311.2 |
| branched-chain amino acid abc transporter permease | CFBP5506_RS14740 | Not Available | Positive | 331827 - 332690 | 30209.2 |
| branched-chain amino acid abc transporter permease | CFBP5506_RS14745 | Not Available | Positive | 332692 - 333699 | 34533.1 |
| abc transporter atp-binding protein | CFBP5506_RS14750 | Not Available | Positive | 333696 - 334460 | 27239.2 |
| abc transporter atp-binding protein | CFBP5506_RS14755 | Not Available | Positive | 334441 - 335157 | 25487.0 |
| giy-yig nuclease family protein | CFBP5506_RS14760 | Not Available | Negative | 335361 - 335651 | 11331.7 |
| murr/rpir family transcriptional regulator | CFBP5506_RS14765 | Not Available | Positive | 335943 - 336758 | 29060.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


